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Substitution matrix
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#	Item
51	8VLQJPXOWLSOHDOLJQPHQWPHWKRGVWRDVVHVVWKHTXDOLW\RI JHQRPLFGDWDDQDO\VLV Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-10-25 20:58:38 Biology Sequence alignment Multiple sequence alignment T-Coffee Structural alignment Sequence analysis Smith–Waterman algorithm Substitution matrix BLOSUM Bioinformatics Computational phylogenetics Science
52	+( + $". BIOINFORMATICS Add to Reading List Source URL: www.tcoffee.org Language: English* - Date: 2009-10-25 20:58:07 Biology Sequence alignment Multiple sequence alignment Structural alignment Substitution matrix Clustal Phylo Conserved sequence T-Coffee Bioinformatics Computational phylogenetics Science
53	8VLQJHQHWLF$OJRULWKPVIRU3DLUZLVHDQG0XOWLSOH 6HTXHQFH$OLJQPHQWV Cédric Notredame Information Génétique et Structurale CNRS-UMR 1889 Add to Reading List Source URL: www.tcoffee.org Language: English* - Date: 2003-01-07 09:00:46 Applied mathematics Sequence alignment Multiple sequence alignment Genetic algorithm Phylo Stochastic optimization BLAST Substitution matrix Smith–Waterman algorithm Computational phylogenetics Bioinformatics Science
54	Sociological Methods & Research http://smr.sagepub.com How Much Does It Cost?: Optimization of Costs in Sequence Analysis of Social Science Data Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-09-07 05:28:42 Science Mathematics Statistics Sequence alignment Substitution matrix Optimal matching Similarity matrix Distance matrix Matrix Bioinformatics Computational phylogenetics Matrices
55	Microsoft Word - FullManuscript_TCS_Figures.docx Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2014-04-03 05:11:09 Biology Multiple sequence alignment Sequence alignment T-Coffee Homology modeling STING Conserved sequence Substitution matrix Homology Bioinformatics Science Computational phylogenetics
56	12 Example: Playfair Cipher Program file for this chapter: playfair Add to Reading List Source URL: www.cs.berkeley.edu Language: English - Date: 2003-12-25 21:48:42 Matrix Cipher Cyberwarfare Four-square cipher Espionage Applied mathematics Two-square cipher Playfair cipher Substitution cipher Cryptography
57	International Journal of Computational Bioscience, 2010 ALIGNMENT-BASED EXTENSION TO DDPIN FEATURE EXTRACTION David Hoksza∗ and Jakub Galgonek∗ Add to Reading List Source URL: siret.ms.mff.cuni.cz Language: English - Date: 2010-10-24 16:35:02 Structural alignment Root-mean-square deviation Template Modeling Score Sequence alignment Sequential structure alignment program BLAST Substitution matrix Protein structure prediction Threading Bioinformatics Science Computational science
58	SProt - From Local to Global Protein Structure Similarity Jakub Galgonek, David Hoksza Department of Software Engineering Faculty of Mathematics and Physics, Charles University in Prague Prague, Czech Republic Email: {ga Add to Reading List Source URL: siret.ms.mff.cuni.cz Language: English - Date: 2010-11-10 15:27:56 Computational science Structural alignment Substitution matrix Amino acid Threading Protein structure prediction BLOSUM Protein structure BLAST Bioinformatics Science Biology
59	.T-coffee Tutorial CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CENTRO DE REGULACCIO GENOMICA, BARCELONA Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2014-04-16 11:38:03 Biotechnology T-Coffee Sequence alignment Multiple sequence alignment FASTA Substitution matrix Sequence analysis Structural alignment STING Bioinformatics Computational phylogenetics Science
60	BMC Bioinformatics BioMed Central Open Access Add to Reading List Source URL: www.ram.org Language: English - Date: 2006-09-25 04:26:20 STING Sequence alignment Sequence logo Substitution matrix Multiple sequence alignment Entropy BLOSUM Sequence motif BLAST Bioinformatics Science Biology

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